Published Workflows | dereeper | GWAS workflow

Galaxy Workflow ' GWAS workflow'

StepAnnotation
Step 1: Input dataset
select at runtime
Step 2: Input dataset
select at runtime
Step 3: Hapmap filter
Output dataset 'output' from step 1
0.25
0.125
0.8
Step 4: Convert genotyping data
Output dataset 'out' from step 3
VCF
True
Step 5: sNMF
Output dataset 'output' from step 4
2
6
50
Step 6: Tassel
Output dataset 'out' from step 3
GLM
Output dataset 'output' from step 2
yes
Output dataset 'best_k_output' from step 5
0.05