Published Pages | dereeper | GWAS workflow

GOBii Genomic Selection Galaxy Workflows

GWAS workflow

This workflow is based on TASSEL v5 software for Genome Wide Association Study (GWAS) analysis, using GLM model with a correction by population structure performed by sNMF software.

Galaxy Workflow | GWAS workflow

Example of input datasets

Genotyping input file in Hapmap format

Galaxy Dataset | Hapmap_input.tab

Phenotyping input file

Galaxy Dataset | 3traits.txt

Complete history

Tutorials

Tutorial video workflow GWAS